epigen/spilterlize_integrate

A Snakemake workflow and MrBiomics module to split, filter, normalize, integrate and select highly variable features of count matrices resulting from next-generation sequencing (NGS) experiments (e.g., RNA-seq, ATAC-seq, ChIP-seq, Methyl-seq, miRNA-seq,...) including confounding factor analysis and diagnostic visualizations.

语言：R · GitHub 星标：54 · Fork：3

话题：atac-seq · batch-effect · bioinformatics · biomedical-data-science · chip-seq · confounding-effects · count-matrix · dimensionality-reduction

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